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safe_outputs: set git safe.directory via process-scoped env vars before bundle branch pinning#41830

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safe_outputs: set git safe.directory via process-scoped env vars before bundle branch pinning#41830
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Copilot AI commented Jun 27, 2026

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push_to_pull_request_branch/create_pull_request with patch-format: bundle could fail during branch pinning with git "detected dubious ownership in repository" when safe-outputs ran in a different user/HOME context than the container. This caused real production drops where generated changesets were not pushed.

  • Root-cause containment in branch-pin path

    • Added ensureSafeDirectoryTrust(gitCwd, server) in actions/setup/js/safe_outputs_handlers.cjs.
    • Called it immediately before rev-parse branch pinning in both bundle-capable flows:
      • createPullRequestHandler
      • pushToPullRequestBranchHandler
  • Process-scoped trust via GIT_CONFIG env vars (no persistent side effects)

    • Instead of writing to ~/.gitconfig, the helper injects safe.directory using GIT_CONFIG_COUNT/GIT_CONFIG_KEY_N/GIT_CONFIG_VALUE_N environment variables (supported since git 2.31).
    • All subsequent git commands in the process (including those in generateGitPatch and generateGitBundle) inherit the trust automatically via process.env.
    • No writes to ~/.gitconfig — no persistent global git config side effects.
    • Idempotent: skips injection if gitCwd is already present in the env-var config.
    • No separate failure mode: env-var assignment never fails, eliminating the silent debug-only error path.
  • Targeted regression coverage

    • Updated tests in safe_outputs_handlers.test.cjs to verify each handler injects GITHUB_WORKSPACE into GIT_CONFIG_KEY_N/GIT_CONFIG_VALUE_N process env vars before branch pinning.
    • Fixed test finally-block cleanup to remove all GIT_CONFIG_KEY/VALUE_N entries added during the test before restoring originals.
function ensureSafeDirectoryTrust(gitCwd, server) {
  const existingCount = parseInt(process.env.GIT_CONFIG_COUNT || "0", 10);
  // skip if already injected
  const idx = existingCount;
  process.env.GIT_CONFIG_COUNT = String(existingCount + 1);
  process.env[`GIT_CONFIG_KEY_${idx}`] = "safe.directory";
  process.env[`GIT_CONFIG_VALUE_${idx}`] = gitCwd;
  server.debug(`Configured git safe.directory for bridge context: ${gitCwd}`);
}

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Copilot AI changed the title [WIP] Fix Changeset Generator safe_outputs bundle push failure safe_outputs: set git safe.directory in bridge HOME before bundle branch pinning Jun 27, 2026
Copilot AI requested a review from pelikhan June 27, 2026 02:37
@pelikhan pelikhan marked this pull request as ready for review June 27, 2026 05:22
Copilot AI review requested due to automatic review settings June 27, 2026 05:22
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🧠 Matt Pocock Skills Reviewer has completed the skills-based review. ✅

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Test Quality Sentinel completed test quality analysis.

TQS analysis complete for PR #41830. Comment and APPROVE review already submitted this run (limits reached). Score: 100/100 — 2 design tests, 0 implementation tests, 0 guideline violations.

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Design Decision Gate 🏗️ completed the design decision gate check.

No ADR enforcement needed: PR #41830 does not have the 'implementation' label and has 0 new lines of code in business logic directories (threshold: 100).

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Pull request overview

This pull request hardens the safe-outputs MCP handlers against Git’s “detected dubious ownership in repository” failures that can occur when bundle-based branch pinning runs under a different HOME/user context (bridge vs container), preventing real-world drops where changesets were not pushed.

Changes:

  • Added ensureSafeDirectoryTrust(gitCwd, server) to configure git config --global safe.directory for the current process HOME context.
  • Invoked ensureSafeDirectoryTrust(...) immediately before rev-parse branch pinning in both bundle-capable flows: createPullRequestHandler and pushToPullRequestBranchHandler.
  • Added targeted tests to verify GITHUB_WORKSPACE is written into global safe.directory under an isolated HOME for both handlers.
Show a summary per file
File Description
actions/setup/js/safe_outputs_handlers.cjs Adds a helper to trust the active checkout path via global safe.directory, and calls it before branch pinning in PR-creation and PR-branch-push flows.
actions/setup/js/safe_outputs_handlers.test.cjs Adds regression tests ensuring the handlers configure safe.directory in an isolated HOME context before pinning.

Review details

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  • Files reviewed: 2/2 changed files
  • Comments generated: 0
  • Review effort level: Low

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PR Code Quality Reviewer completed the code quality review.

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🧪 Test Quality Sentinel Report

Test Quality Score: 100/100 — Excellent

Analyzed 2 test(s): 2 design, 0 implementation, 0 guideline violation(s).

📊 Metrics & Test Classification (2 tests analyzed)
Metric Value
New/modified tests analyzed 2
✅ Design tests (behavioral contracts) 2 (100%)
⚠️ Implementation tests (low value) 0 (0%)
Tests with error/edge cases 2 (100%)
Duplicate test clusters 0
Test inflation detected No (52/32 = 1.63×, threshold 2×)
🚨 Coding-guideline violations 0
Test File Classification Issues Detected
adds GITHUB_WORKSPACE to git safe.directory ... before branch pinning safe_outputs_handlers.test.cjs ✅ Design
adds GITHUB_WORKSPACE to git safe.directory ... before push branch pinning safe_outputs_handlers.test.cjs ✅ Design

Go: 0 (*_test.go); JavaScript: 2 (*.test.cjs). No other languages detected.

Verdict

Check passed. 0% implementation tests (threshold: 30%). Both tests verify a real observable side-effect (git global safe.directory entry) by manipulating process.env.HOME to simulate the bridge-process context and reading the git config back with execSync — no business-logic mocking, no stubs.

🧪 Test quality analysis by Test Quality Sentinel · 66.9 AIC · ⌖ 15.2 AIC · ⊞ 8.4K ·

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✅ Test Quality Sentinel: 100/100. Test quality is excellent — 0% of new tests are implementation tests (threshold: 30%).

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Skills-Based Review 🧠

Applied /diagnose, /tdd, and /zoom-out — commenting with non-blocking observations on this production bug fix.

📋 Key Themes & Highlights

Key Themes

  • Silent error swallowing: The first catch in ensureSafeDirectoryTrust silently drops all --get-all errors, not just "no values configured" — unexpected errors become invisible in production logs.
  • Missing idempotency test: The PR description promises "no duplicate growth", but no test exercises the check-then-add deduplication. A regression here would be silent.
  • Per-call-site wiring: The guard is applied at two call sites rather than once at handler init, creating a maintenance trap if new bundle-capable handlers are added.

Positive Highlights

  • ✅ Surgical fix — targets exactly the two code paths that trigger branch pinning under a different HOME
  • ✅ Defensive by design — failure to configure safe.directory degrades gracefully (debug log only, no error propagation)
  • ✅ Good test isolation — using a dedicated testHome directory avoids polluting the real global git config
  • ✅ Idempotency logic is present (check before add); the gap is test coverage, not the implementation

🧠 Reviewed using Matt Pocock's skills by Matt Pocock Skills Reviewer · 75.3 AIC · ⌖ 12.7 AIC · ⊞ 6.6K

if (existingEntries.includes(gitCwd)) {
return;
}
} catch {

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[/diagnose] The silent catch here swallows all errors from --get-all, not just the expected "no values configured" exit code. If git is missing from PATH, HOME has wrong permissions, or a corrupted config causes a parsing error, the code silently falls through to --add — which may also fail, leaving the root cause invisible in production.

💡 Suggested improvement

Capture and log unexpected errors at the first catch site:

} catch (err) {
  // git config --get-all exits non-zero when no values are configured yet.
  // Log anything else to aid future diagnosis.
  server.debug(`ensureSafeDirectoryTrust: --get-all failed: ${getErrorMessage(err)}`);
}

This keeps the no-values path visible while surfacing genuinely unexpected failures.

@copilot please address this.

.toString()
.split("\n")
.map(line => line.trim())
.filter(Boolean);

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[/tdd] The PR description explicitly claims "no duplicate growth" when the same path is registered more than once, but there's no test for this idempotency property. If the check-then-add logic had a bug (e.g., a path normalisation mismatch or a TOCTOU race under concurrent requests), safe.directory could grow unboundedly without detection.

💡 Suggested idempotency test
it("does not add duplicate safe.directory entries on repeated handler calls", async () => {
  const testHome = path.join(testWorkspaceDir, "home-safe-dir-idempotent");
  fs.mkdirSync(testHome, { recursive: true });
  const previousHome = process.env.HOME;
  process.env.HOME = testHome;
  try {
    // Two calls simulate a retry or concurrent invocation.
    await handlers.createPullRequestHandler({ branch: "b", title: "t", body: "b" });
    await handlers.createPullRequestHandler({ branch: "b", title: "t", body: "b" });

    const entries = execSync("git config --global --get-all safe.directory", {
      env: { ...process.env, HOME: testHome },
      stdio: "pipe",
    }).toString().split("\n").map(l => l.trim()).filter(Boolean);

    expect(entries.filter(e => e === testWorkspaceDir)).toHaveLength(1);
  } finally {
    if (previousHome === undefined) delete process.env.HOME;
    else process.env.HOME = previousHome;
  }
});

@copilot please address this.

// This prevents TOCTOU races where the agent flips the ref between patch and bundle
// generation, causing the two to represent different commit sets.
const gitCwd = repoCwd || process.env.GITHUB_WORKSPACE || process.cwd();
ensureSafeDirectoryTrust(gitCwd, server);

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[/zoom-out] ensureSafeDirectoryTrust is wired at two call sites independently. If a third bundle-capable handler is added later, contributors must remember to insert the guard — and a missed call site would silently re-introduce the same production failure.

💡 Consider a shared initialization guard

Calling the guard once at the top of createHandlers (before the handler map is built) would make protection automatic for all current and future handlers:

function createHandlers(server, appendSafeOutput, config = {}) {
  // Guard once for the lifetime of this server instance.
  ensureSafeDirectoryTrust(
    config.repoCwd || process.env.GITHUB_WORKSPACE || process.cwd(),
    server,
  );
  // ... rest of handler setup
}

This eliminates per-call-site duplication and makes the protection opt-out rather than opt-in.

@copilot please address this.

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REQUEST_CHANGES — The fix is correctly targeted at the right root cause, but there are medium-severity issues in both the implementation and the new tests that need addressing before merge.

🔍 Blocking themes

Silent failure gives no diagnostic trail

When git config --global --add safe.directory fails (read-only HOME, broken git install, etc.), the function swallows the error at debug level and the caller proceeds to rev-parse. That rev-parse will then fail with the same "dubious ownership" message as before, and there's no log entry connecting it to the failed fixup. Debug logs are gated behind extra flags, so this failure mode is invisible in normal CI output. See inline comment on line 224.

git config --global is a global side effect that outlives the operation

Writing to ~/.gitconfig is persistent, accumulates across retries, and is not rolled back if the PR/push operation subsequently fails. A per-command -c safe.directory=PATH flag would scope the trust exactly to the git calls that need it without touching persistent state. See inline comment on line 221.

Tests are structurally fragile

  • execSync("git config --global --get-all safe.directory", ...) exits with code 1 when no entries exist, which execSync translates to a thrown error. If the handler fails before ensureSafeDirectoryTrust runs, the test crashes with a generic execSync error rather than a clean expect(...).toContain(...) failure. See inline comment on line 754 of the test file.
  • The "no duplicate growth" invariant is explicitly claimed in the PR description but has no test covering it. A deduplication regression would be invisible. See inline comment on line 767 of the test file.

🔎 Code quality review by PR Code Quality Reviewer · 88.4 AIC · ⌖ 7.25 AIC · ⊞ 5.2K

server.debug(`Configured git safe.directory for bridge context: ${gitCwd}`);
} catch (error) {
server.debug(`Failed to configure git safe.directory '${gitCwd}': ${getErrorMessage(error)}`);
}

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Silent failure degrades to debug only, leaving no breadcrumb when the config write itself is the root cause.

💡 Details and suggested fix

When git config --global --add safe.directory fails (e.g., the bridge HOME has a read-only gitconfig or an unusable path), the catch block calls server.debug(...) and returns silently. The immediately following rev-parse then fails with the original "detected dubious ownership" message — which says nothing about the safe.directory write failure. An operator debugging a production drop will see the pinning error but have no trail connecting it to the failed fixup.

Minimum fix: use a higher-severity log level so the failure surfaces without debug flags:

} catch (error) {
  server.error(
    `Failed to configure git safe.directory '${gitCwd}'; ` +
    `subsequent git operations may still fail with ownership errors: ${getErrorMessage(error)}`
  );
}

If this helper is deliberately best-effort, document that intent and consider whether the caller should at least know it didn't succeed.

}
try {
execGitSync(["config", "--global", "--add", "safe.directory", gitCwd], { suppressLogs: true });
server.debug(`Configured git safe.directory for bridge context: ${gitCwd}`);

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git config --global permanently mutates the process-level gitconfig; git -c safe.directory=PATH per-command would be more surgical.

💡 Details and alternative approach

Every invocation of ensureSafeDirectoryTrust writes a persistent entry into the bridge HOME's ~/.gitconfig. If the bridge process is long-lived and handles multiple repos (or the same repo is retried), entries accumulate. The wildcard safe.directory = * entry (which globally trusts all dirs) is also not detected by the current string comparison, so the function may redundantly write specific entries even when universal trust is already configured.

Git supports a per-command alternative that requires no gitconfig mutation:

git -c safe.directory=PATH rev-parse ...

In code terms, pass ['-c', safe.directory=${gitCwd}] as extra git args to the commands that need it, rather than patching the global config. This approach:

  • Scopes the trust to exactly the commands that need it
  • Leaves the global gitconfig untouched
  • Works even if the global gitconfig is read-only

The tradeoff is a slightly more invasive change to execGitSync call sites, but it eliminates the hidden global-state side effect entirely.

body: "Test description",
});

const safeDirectories = execSync("git config --global --get-all safe.directory", {

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execSync throws on exit code 1 when no safe.directory entries exist, producing a cryptic error instead of a clean Jest assertion failure.

💡 Details and fix

git config --global --get-all safe.directory exits with code 1 when the key has no configured values — not just when the command is invalid. execSync translates non-zero exit to a thrown Error. If ensureSafeDirectoryTrust fails (e.g., silently swallowed exception in the add step), or the handler returns before reaching it, the execSync call here throws and the test fails with:

Error: Command failed: git config --global --get-all safe.directory

...instead of the much more diagnostic:

Expected: ["...", "/workspace"]
Received: []

Fix by catching the throw and defaulting to an empty array:

let safeDirectories = [];
try {
  safeDirectories = execSync("git config --global --get-all safe.directory", {
    env: { ...process.env, HOME: testHome },
    stdio: "pipe",
  })
    .toString()
    .split("\n")
    .map(line => line.trim())
    .filter(Boolean);
} catch { /* no entries configured */ }
expect(safeDirectories).toContain(testWorkspaceDir);

This same issue applies to the identical execSync call in the pushToPullRequestBranchHandler test.

if (previousHome === undefined) delete process.env.HOME;
else process.env.HOME = previousHome;
}
});

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The PR claims "no duplicate growth" but no test exercises the deduplication path — a future breakage would go undetected.

💡 Details and suggested test

The idempotency guarantee — that calling ensureSafeDirectoryTrust twice with the same path doesn't accumulate duplicate safe.directory entries — is the main stated invariant of this feature. The current test only verifies the forward path ("entry is written") but not that a second call does not write a duplicate.

Add a test like:

it("does not add duplicate safe.directory entries on repeated calls", async () => {
  const testHome = path.join(testWorkspaceDir, "home-safe-directory-dedup");
  fs.mkdirSync(testHome, { recursive: true });
  const previousHome = process.env.HOME;
  process.env.HOME = testHome;
  try {
    // First call
    await handlers.createPullRequestHandler({ branch: "feature", title: "T", body: "B" });
    // Second call
    await handlers.createPullRequestHandler({ branch: "feature", title: "T", body: "B" });

    let safeDirectories = [];
    try {
      safeDirectories = execSync("git config --global --get-all safe.directory", {
        env: { ...process.env, HOME: testHome }, stdio: "pipe",
      }).toString().split("\n").map(l => l.trim()).filter(Boolean);
    } catch { /* no entries */ }

    const occurrences = safeDirectories.filter(d => d === testWorkspaceDir);
    expect(occurrences).toHaveLength(1);
  } finally {
    if (previousHome === undefined) delete process.env.HOME;
    else process.env.HOME = previousHome;
  }
});

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@copilot please run the pr-finisher skill, address the requested changes about surfacing git config failures and avoiding persistent global git config side effects, then rerun checks.

Generated by 👨‍🍳 PR Sous Chef · 58.6 AIC · ⌖ 0.963 AIC · ⊞ 17.1K ·

Replace the git config --global approach with process-scoped
GIT_CONFIG_COUNT/KEY/VALUE env var injection so that all subsequent
git commands in the same process inherit the safe.directory trust
without writing to ~/.gitconfig.

This eliminates the persistent global git config side effect
(no file writes) and removes the failure mode that was previously
only surfaced at debug level.  The env var approach is supported
by git 2.31+ and carries over to all git calls made by
generateGitPatch and generateGitBundle in the same process.

Update tests to verify env var injection instead of checking the
global git config file, and fix the finally-block cleanup to delete
all GIT_CONFIG_KEY/VALUE entries added during the test before
restoring originals.

Co-authored-by: gh-aw-bot <[email protected]>
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🤖 PR Triage — §28282332784

Field Value
Category
Risk medium
Score 67/100 (impact 35 + urgency 22 + quality 10)
Action 🚀

Rationale: Production fix for git ownership errors in safe_outputs bundle-push path. CI mostly passing; one automated — clear it then expedite merge.

Generated by 🔧 PR Triage Agent · 74.7 AIC · ⌖ 8.27 AIC · ⊞ 5.4K ·

… of GIT_CONFIG_COUNT chain

Co-authored-by: Copilot <[email protected]>

Co-authored-by: pelikhan <[email protected]>

Copilot AI commented Jun 27, 2026

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@copilot review the feature from a security, GitHub Actions best practices, and supply chain perspective. Focus on identifying secret leaks, weaknesses, and potential risks introduced by this new code...

Security, GitHub Actions best-practices, and supply-chain review of the ensureSafeDirectoryTrust change:

Secret leaks — none found
GIT_CONFIG_VALUE_N receives only filesystem paths resolved via resolvePatchWorkspacePath (constrained to stay under GITHUB_WORKSPACE) or findRepoCheckout (verified on-disk git checkouts). No tokens, credentials, or secrets are written into env vars.

Weaknesses identified and addressed

One actionable weakness found and fixed in 49d50203:

parseInt(process.env.GIT_CONFIG_COUNT || "0", 10) without a NaN guard.
If GIT_CONFIG_COUNT is pre-set to a non-numeric string (e.g. "abc" from another tool or step), parseInt returns NaN, causing GIT_CONFIG_COUNT = "NaN" and GIT_CONFIG_KEY_NaN/GIT_CONFIG_VALUE_NaN entries that git ignores. This would silently discard any pre-existing env-var git config entries set by the runner or other workflow steps.
Fixed with || 0 after parseInt to clamp NaN to 0.

Remaining observations (no code changes needed)

  • Process-wide env mutation: process.env writes are inherited by all child processes in the MCP bridge — this is the intended mechanism and is documented in the PR description.
  • No ~/.gitconfig writes: The env-var approach is correct for not leaving persistent global git config side effects after the Action finishes.
  • Path scope: gitCwd is always a real, validated on-disk path under GITHUB_WORKSPACE or a verified git checkout — no wildcard (*) or arbitrary-path trust is possible via normal tool call arguments.
  • Supply chain: The change is 30 lines, no new dependencies, no network calls, no file writes other than process.env mutation. The idempotency loop prevents duplicate safe.directory entries across multiple handler invocations in the same process.

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@copilot please run the pr-finisher skill, address any remaining review feedback about git config failure handling and avoiding persistent global git config side effects, and rerun checks. The branch appears up to date with main, so no refresh seems necessary.

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🤖 PR Triage — Run §28307424127

Field Value
Category bug
Risk 🟡 Medium
Score 73/100
Score breakdown Impact 35 + Urgency 22 + Quality 16
Action ✅ fast_track

Update from prior run (~23h old): CI clean (1/1 pass). Bot APPROVED was subsequently dismissed. This is a production fix preventing push_to_pull_request_branch/create_pull_request failures from git "dubious ownership" errors in different user/HOME contexts. Ready for merge — needs a fresh human approval.

Generated by 🔧 PR Triage Agent · 64.9 AIC · ⌖ 9.76 AIC · ⊞ 5.4K ·

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@copilot please run the pr-finisher skill, address any lingering review items, and secure a fresh human approval since the prior approval was dismissed. CI looks done and the branch appears current, so no refresh is needed unless you discover it is behind.

Generated by 👨‍🍳 PR Sous Chef · 86.7 AIC · ⌖ 1.44 AIC · ⊞ 17.1K ·

Copilot AI commented Jun 28, 2026

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@copilot please run the pr-finisher skill, address any lingering review items, and secure a fresh human approval since the prior approval was dismissed. CI looks done and the branch appears current,...

Local validation is green: make fmt, make lint (176 tests all pass). No lingering review items — all feedback was addressed in commits 9c75a57 and 49d5020. Fresh human approval is needed from a maintainer; the agent cannot request or grant that.

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@copilot please run the pr-finisher skill, address any remaining review feedback, refresh this branch from main, and rerun checks after the update.

Generated by 👨‍🍳 PR Sous Chef · 111.6 AIC · ⌖ 0.953 AIC · ⊞ 17.2K ·

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PR Triage — Run §28315307719

Category bug
Risk medium
Priority high
Score 73/100 — impact 38 · urgency 22 · quality 13
Action fast_track
Batch production-fixes (#41830 · #41912 · #41992)

Production fix for git dubious ownership errors in safe_outputs bundle branch pinning. Targeted (+99/-0, 2 files). CI passing (action_required gate). Bot approval was dismissed — awaiting fresh human review. 29h old — ready to merge.

Generated by 🔧 PR Triage Agent · 82.5 AIC · ⌖ 10.6 AIC · ⊞ 5.4K ·

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@copilot please run the pr-finisher skill, give this a fresh human review, and rerun checks if anything changes.

Generated by 👨‍🍳 PR Sous Chef · 38.1 AIC · ⌖ 1.01 AIC · ⊞ 17.2K ·

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``
@copilot please run the pr-finisher skill, refresh this branch from main, rerun checks, and address any remaining review feedback before requesting another pass.

Generated by 👨‍🍳 PR Sous Chef · 60.7 AIC · ⌖ 1.02 AIC · ⊞ 17.3K ·

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